Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Gm24514-201ENSMUST00000174961 285 ntBASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Gm45224-201ENSMUST00000208203 414 ntBASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Gm45433-201ENSMUST00000209386 247 ntBASIC13.32□□□□□ -0.28
Smc1aQ9CU62 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1aQ9CU62 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gm14999-201ENSMUST00000121039 624 ntBASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smc1aQ9CU62 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1aQ9CU62 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms