Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm14832-201ENSMUST00000121289 322 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm9136-201ENSMUST00000193368 454 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm18187-201ENSMUST00000196476 984 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm17931-201ENSMUST00000208132 634 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.17□□□□□ -0.62
Nkd1Q99MH6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd1Q99MH6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm14247-201ENSMUST00000120950 237 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Snora78-201ENSMUST00000158630 128 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm5706-201ENSMUST00000181525 993 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm37489-201ENSMUST00000191883 159 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm43118-201ENSMUST00000199149 775 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm45880-201ENSMUST00000213041 853 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd1Q99MH6 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nkd1Q99MH6 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.15□□□□□ -0.62
Nkd1Q99MH6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkd1Q99MH6 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.15□□□□□ -0.62
Nkd1Q99MH6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkd1Q99MH6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkd1Q99MH6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkd1Q99MH6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms