Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm5616-201ENSMUST00000165252 384 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm8741-201ENSMUST00000174736 384 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm27627-201ENSMUST00000183644 150 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm29615-201ENSMUST00000185371 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28224-201ENSMUST00000186078 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm29001-201ENSMUST00000186177 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28292-201ENSMUST00000186593 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28101-201ENSMUST00000187608 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm29076-201ENSMUST00000187689 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28302-201ENSMUST00000187931 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28646-201ENSMUST00000188220 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28205-201ENSMUST00000189177 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm29032-201ENSMUST00000189797 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm28695-201ENSMUST00000190300 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm37448-201ENSMUST00000192795 697 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 AY036118-201ENSMUST00000200021 923 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm45433-201ENSMUST00000209386 247 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm29787-201ENSMUST00000222129 849 ntBASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tlr3Q99MB1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12616-201ENSMUST00000118594 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm15004-201ENSMUST00000119192 630 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm11660-201ENSMUST00000120955 412 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12624-201ENSMUST00000177615 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12621-201ENSMUST00000177760 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12615-201ENSMUST00000177970 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12622-201ENSMUST00000177975 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12627-201ENSMUST00000178412 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12625-201ENSMUST00000179122 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12614-201ENSMUST00000179586 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm12613-201ENSMUST00000180323 382 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm5523-201ENSMUST00000180415 997 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Gm17827-201ENSMUST00000211825 742 ntBASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tlr3Q99MB1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms