Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm2991-201ENSMUST00000173338 480 ntBASIC11.48□□□□□ -0.57
Cstf3Q99LI7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cstf3Q99LI7 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.47□□□□□ -0.57
Cstf3Q99LI7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm18893-201ENSMUST00000198416 943 ntBASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gm7399-201ENSMUST00000032395 858 ntBASIC11.47□□□□□ -0.57
Cstf3Q99LI7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cstf3Q99LI7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Rgr-203ENSMUST00000225070 4704 ntBASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms