Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhb6Q91XZ4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm12380-201ENSMUST00000119012 544 ntBASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm18038-201ENSMUST00000197900 485 ntBASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb6Q91XZ4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm38117-201ENSMUST00000194653 939 ntBASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb6Q91XZ4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms