Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb11Q91UZ8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm11660-201ENSMUST00000120955 412 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm14363-201ENSMUST00000122304 409 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm43184-201ENSMUST00000197247 542 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm18038-201ENSMUST00000197900 485 ntBASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb11Q91UZ8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm11439-201ENSMUST00000118598 409 ntBASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm9797-202ENSMUST00000218003 294 ntBASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb11Q91UZ8 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.15□□□□□ -0.47
Pcdhb11Q91UZ8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb11Q91UZ8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.15□□□□□ -0.47
Pcdhb11Q91UZ8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb11Q91UZ8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb11Q91UZ8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb11Q91UZ8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb11Q91UZ8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms