Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
H1fooQ8VIK3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H1fooQ8VIK3 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.95□□□□□ -0.82
H1fooQ8VIK3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm14109-201ENSMUST00000118814 309 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm6963-201ENSMUST00000147879 379 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm38241-201ENSMUST00000192641 898 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm19187-201ENSMUST00000206781 892 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Cts7-204ENSMUST00000225321 1257 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H1fooQ8VIK3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.93□□□□□ -0.82
H1fooQ8VIK3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms