Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim60Q8VI40 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm11989-201ENSMUST00000117240 672 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm12742-201ENSMUST00000117326 410 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm11439-201ENSMUST00000118598 409 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm11362-201ENSMUST00000118838 850 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.25□□□□□ -0.45
Trim60Q8VI40 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim60Q8VI40 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm25214-201ENSMUST00000104573 129 ntBASIC12.24□□□□□ -0.45
Trim60Q8VI40 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm14644-201ENSMUST00000116671 647 ntBASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm5187-201ENSMUST00000117317 991 ntBASIC12.24□□□□□ -0.45
Trim60Q8VI40 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm13786-201ENSMUST00000122371 333 ntBASIC12.24□□□□□ -0.45
Trim60Q8VI40 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms