Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm12566-201ENSMUST00000121479 359 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 B9d1os-201ENSMUST00000137010 674 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm9022-201ENSMUST00000182482 992 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm17812-201ENSMUST00000204935 318 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gm18730-201ENSMUST00000218038 343 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.52□□□□□ -0.56
SynpoQ8CC35 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynpoQ8CC35 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.52□□□□□ -0.57
SynpoQ8CC35 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.52□□□□□ -0.57
SynpoQ8CC35 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Gm9230-201ENSMUST00000188228 532 ntBASIC11.52□□□□□ -0.57
SynpoQ8CC35 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SynpoQ8CC35 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.51□□□□□ -0.57
SynpoQ8CC35 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynpoQ8CC35 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms