Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf2Q8BZT2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf2Q8BZT2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf2Q8BZT2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf2Q8BZT2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf2Q8BZT2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf2Q8BZT2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm11949-201ENSMUST00000117640 372 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm11783-201ENSMUST00000119549 885 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm11246-201ENSMUST00000120880 345 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm9192-201ENSMUST00000183221 985 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm27438-201ENSMUST00000183480 110 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Mir8115-201ENSMUST00000184992 119 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm28937-201ENSMUST00000185413 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm29400-201ENSMUST00000187208 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm28662-201ENSMUST00000188446 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm28251-201ENSMUST00000188835 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm37318-201ENSMUST00000194325 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm38017-201ENSMUST00000194768 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm37287-201ENSMUST00000195449 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm37793-201ENSMUST00000195548 695 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gm45113-201ENSMUST00000207518 165 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf2Q8BZT2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm11836-201ENSMUST00000121022 441 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm24844-201ENSMUST00000158679 127 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm4654-201ENSMUST00000183305 982 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm38151-201ENSMUST00000195085 289 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm8365-201ENSMUST00000197334 648 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm2517-201ENSMUST00000215651 348 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Gm7940-201ENSMUST00000218195 769 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3rf2Q8BZT2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3rf2Q8BZT2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3rf2Q8BZT2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms