Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm13263-201ENSMUST00000121271 838 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm23699-201ENSMUST00000158835 135 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Spcs1-203ENSMUST00000226374 592 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm1821-202ENSMUST00000227415 750 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Ntng1-201ENSMUST00000051253 327 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm9062-201ENSMUST00000117712 727 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm13809-201ENSMUST00000117921 597 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm7940-201ENSMUST00000218195 769 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nup54Q8BTS4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm12165-201ENSMUST00000117047 342 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms