Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm38188-201ENSMUST00000192879 856 ntBASIC11.78□□□□□ -0.52
Ubp1Q811S7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 AC172027.1-201ENSMUST00000217659 337 ntBASIC11.78□□□□□ -0.52
Ubp1Q811S7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ubp1Q811S7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ubp1Q811S7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.77□□□□□ -0.52
Ubp1Q811S7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubp1Q811S7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ubp1Q811S7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubp1Q811S7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubp1Q811S7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm24541-201ENSMUST00000103871 96 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm14201-201ENSMUST00000117627 289 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm14208-201ENSMUST00000119645 678 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm15610-201ENSMUST00000120584 195 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm14017-201ENSMUST00000121934 386 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm5706-201ENSMUST00000181525 993 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm2260-201ENSMUST00000184965 657 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm7003-201ENSMUST00000195089 312 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm17931-201ENSMUST00000208132 634 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubp1Q811S7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.77□□□□□ -0.53
Ubp1Q811S7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.76□□□□□ -0.53
Ubp1Q811S7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.76□□□□□ -0.53
Ubp1Q811S7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubp1Q811S7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ubp1Q811S7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms