Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm7848-201ENSMUST00000210739 718 ntBASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.27□□□□□ -0.45
Trim62Q80V85 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.27□□□□□ -0.45
Trim62Q80V85 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm25732-201ENSMUST00000175168 60 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim62Q80V85 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm6108-201ENSMUST00000208365 367 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm45575-201ENSMUST00000210283 548 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm7940-201ENSMUST00000218195 769 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.26□□□□□ -0.45
Trim62Q80V85 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim62Q80V85 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trim62Q80V85 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trim62Q80V85 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim62Q80V85 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim62Q80V85 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trim62Q80V85 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.25□□□□□ -0.45
Trim62Q80V85 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.25□□□□□ -0.45
Trim62Q80V85 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim62Q80V85 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.25□□□□□ -0.45
Trim62Q80V85 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim62Q80V85 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.25□□□□□ -0.45
Trim62Q80V85 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Ntng1-201ENSMUST00000051253 327 ntBASIC12.25□□□□□ -0.45
Trim62Q80V85 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim62Q80V85 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms