Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Gm26047-202ENSMUST00000198840 115 ntBASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Snrnp40Q6PE01 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm25545-201ENSMUST00000122673 323 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm42816-201ENSMUST00000198433 325 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 AC140375.1-201ENSMUST00000225421 694 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Snrnp40Q6PE01 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Gm14270-201ENSMUST00000118388 846 ntBASIC10.42□□□□□ -0.74
Snrnp40Q6PE01 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms