Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxd4Q60688 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.67□□□□□ -0.38
Foxd4Q60688 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm8213-201ENSMUST00000118191 441 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm12384-201ENSMUST00000119228 919 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm3715-201ENSMUST00000172308 617 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm27514-201ENSMUST00000183692 110 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm27331-201ENSMUST00000183705 60 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm18382-201ENSMUST00000194394 582 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm7399-201ENSMUST00000032395 858 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Foxd4Q60688 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 AC153959.1-201ENSMUST00000213617 1694 ntBASIC12.67□□□□□ -0.38
Foxd4Q60688 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxd4Q60688 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm37396-201ENSMUST00000191827 1495 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm12105-201ENSMUST00000120846 779 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm15530-201ENSMUST00000122206 555 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm27845-201ENSMUST00000184479 114 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm5370-201ENSMUST00000187187 574 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm20915-201ENSMUST00000191575 663 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm37497-201ENSMUST00000195830 798 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.66□□□□□ -0.38
Foxd4Q60688 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Gm18054-201ENSMUST00000207539 555 ntBASIC12.66□□□□□ -0.38
Foxd4Q60688 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Foxd4Q60688 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Foxd4Q60688 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms