Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm15610-201ENSMUST00000120584 195 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm14247-201ENSMUST00000120950 237 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm18584-201ENSMUST00000203098 964 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm807-202ENSMUST00000224929 408 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav15-1-dv6-1Q5R1D2 Gm24644-201ENSMUST00000157114 139 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm6244-201ENSMUST00000178732 841 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm5356-201ENSMUST00000093326 615 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Btrc-209ENSMUST00000224478 2194 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms