Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm13035-201ENSMUST00000117496 342 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm12501-201ENSMUST00000119163 529 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Mir5120-201ENSMUST00000175020 78 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm5733-201ENSMUST00000190232 939 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Gm19208-201ENSMUST00000213861 912 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nlrc4Q3UP24 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm8100-201ENSMUST00000182906 988 ntBASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm4482-201ENSMUST00000200876 742 ntBASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm2553-201ENSMUST00000215986 605 ntBASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nlrc4Q3UP24 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Nlrc4Q3UP24 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms