Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm14723-201ENSMUST00000118686 215 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm43758-201ENSMUST00000199500 367 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm19287-201ENSMUST00000203190 358 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Brf2Q3UAW9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm13296-201ENSMUST00000117854 997 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms