Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm11637-201ENSMUST00000120601 592 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm26185-201ENSMUST00000157692 266 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm27243-201ENSMUST00000183964 521 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm38241-201ENSMUST00000192641 898 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 AW822252-206ENSMUST00000208904 237 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm19165-201ENSMUST00000204453 1982 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm11298-201ENSMUST00000120503 1799 ntBASIC8.09□□□□□ -1.11
Cops9Q3U898 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Cops9Q3U898 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.12
Cops9Q3U898 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Cops9Q3U898 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Cops9Q3U898 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Cops9Q3U898 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.09□□□□□ -1.12
Cops9Q3U898 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Dgkd-201ENSMUST00000027517 5695 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm13453-201ENSMUST00000118708 357 ntBASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm13492-201ENSMUST00000119772 665 ntBASIC8.08□□□□□ -1.12
Cops9Q3U898 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm5354-201ENSMUST00000182417 973 ntBASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm9022-201ENSMUST00000182482 992 ntBASIC8.08□□□□□ -1.12
Cops9Q3U898 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC8.08□□□□□ -1.12
Cops9Q3U898 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC8.08□□□□□ -1.12
Cops9Q3U898 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Cdk7-205ENSMUST00000225990 1159 ntBASIC8.08□□□□□ -1.12
Cops9Q3U898 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Cops9Q3U898 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cops9Q3U898 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms