Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm22138-201ENSMUST00000158748 128 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm29155-201ENSMUST00000185910 269 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm38210-201ENSMUST00000191944 809 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm18711-201ENSMUST00000199341 750 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm26035-201ENSMUST00000083065 308 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Snora73b-201ENSMUST00000083419 205 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.06□□□□□ -0.48
Ebf1Q07802 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.05□□□□□ -0.48
Ebf1Q07802 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm7666-201ENSMUST00000146631 819 ntBASIC12.05□□□□□ -0.48
Ebf1Q07802 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm22144-201ENSMUST00000157402 102 ntBASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Mir6958-201ENSMUST00000184207 73 ntBASIC12.05□□□□□ -0.48
Ebf1Q07802 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.05□□□□□ -0.48
Ebf1Q07802 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.05□□□□□ -0.48
Ebf1Q07802 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.05□□□□□ -0.48
Ebf1Q07802 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ebf1Q07802 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf1Q07802 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm11663-201ENSMUST00000117888 290 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm11246-201ENSMUST00000120880 345 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Mir1901-201ENSMUST00000122616 78 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms