Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Col9a2Q07643 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Col9a2Q07643 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.83□□□□□ -0.35
Col9a2Q07643 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col9a2Q07643 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col9a2Q07643 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm13937-201ENSMUST00000121000 988 ntBASIC12.83□□□□□ -0.36
Col9a2Q07643 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm29499-201ENSMUST00000189151 486 ntBASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm28329-201ENSMUST00000191208 689 ntBASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm29171-201ENSMUST00000191397 486 ntBASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.83□□□□□ -0.36
Col9a2Q07643 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a2Q07643 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Gm17825-201ENSMUST00000206836 794 ntBASIC12.83□□□□□ -0.36
Col9a2Q07643 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col9a2Q07643 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col9a2Q07643 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col9a2Q07643 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col9a2Q07643 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a2Q07643 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.82□□□□□ -0.36
Col9a2Q07643 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Gm11960-201ENSMUST00000122068 925 ntBASIC12.82□□□□□ -0.36
Col9a2Q07643 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.82□□□□□ -0.36
Col9a2Q07643 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Gm8342-201ENSMUST00000209839 757 ntBASIC12.82□□□□□ -0.36
Col9a2Q07643 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.82□□□□□ -0.36
Col9a2Q07643 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col9a2Q07643 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col9a2Q07643 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.81□□□□□ -0.36
Col9a2Q07643 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.81□□□□□ -0.36
Col9a2Q07643 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a2Q07643 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms