Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Gm12314-201ENSMUST00000118104 538 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Gm18827-201ENSMUST00000188341 790 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.08□□□□□ -0.48
Thumpd3P97770 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Thumpd3P97770 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Thumpd3P97770 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Thumpd3P97770 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm24830-201ENSMUST00000102024 166 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.07□□□□□ -0.48
Thumpd3P97770 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm10076-201ENSMUST00000073238 384 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm26232-201ENSMUST00000083360 166 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Rgr-203ENSMUST00000225070 4704 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.07□□□□□ -0.48
Thumpd3P97770 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Thumpd3P97770 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.06□□□□□ -0.48
Thumpd3P97770 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Thumpd3P97770 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Thumpd3P97770 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Thumpd3P97770 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.06□□□□□ -0.48
Thumpd3P97770 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.06□□□□□ -0.48
Thumpd3P97770 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.06□□□□□ -0.48
Thumpd3P97770 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thumpd3P97770 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.06□□□□□ -0.48
Thumpd3P97770 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Thumpd3P97770 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms