Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Lim2P56563 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.86□□□□□ -0.51
Lim2P56563 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lim2P56563 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lim2P56563 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.86□□□□□ -0.51
Lim2P56563 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Gm8343-201ENSMUST00000182705 994 ntBASIC11.86□□□□□ -0.51
Lim2P56563 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lim2P56563 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.86□□□□□ -0.51
Lim2P56563 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Gm26448-201ENSMUST00000082446 203 ntBASIC11.86□□□□□ -0.51
Lim2P56563 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.86□□□□□ -0.51
Lim2P56563 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.86□□□□□ -0.51
Lim2P56563 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.86□□□□□ -0.51
Lim2P56563 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lim2P56563 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.85□□□□□ -0.51
Lim2P56563 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lim2P56563 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.85□□□□□ -0.51
Lim2P56563 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.85□□□□□ -0.51
Lim2P56563 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.85□□□□□ -0.51
Lim2P56563 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Gm807-202ENSMUST00000224929 408 ntBASIC11.85□□□□□ -0.51
Lim2P56563 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Gm5705-201ENSMUST00000066241 711 ntBASIC11.85□□□□□ -0.51
Lim2P56563 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.85□□□□□ -0.51
Lim2P56563 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lim2P56563 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lim2P56563 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms