Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm35713-201ENSMUST00000210516 199 ntBASIC14.97□□□□□ -0.01
Msh6P54276 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.97□□□□□ -0.01
Msh6P54276 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Msh6P54276 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.97□□□□□ -0.01
Msh6P54276 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Msh6P54276 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.97□□□□□ -0.01
Msh6P54276 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.96□□□□□ -0.01
Msh6P54276 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Msh6P54276 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.96□□□□□ -0.01
Msh6P54276 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.96□□□□□ -0.01
Msh6P54276 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.96□□□□□ -0.01
Msh6P54276 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Msh6P54276 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Msh6P54276 Gm13022-201ENSMUST00000121181 285 ntBASIC14.96□□□□□ -0.02
Msh6P54276 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 Gm12030-201ENSMUST00000121917 223 ntBASIC14.96□□□□□ -0.02
Msh6P54276 Gm25545-201ENSMUST00000122673 323 ntBASIC14.96□□□□□ -0.02
Msh6P54276 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.96□□□□□ -0.02
Msh6P54276 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.96□□□□□ -0.02
Msh6P54276 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Msh6P54276 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 Gm44315-201ENSMUST00000203041 219 ntBASIC14.96□□□□□ -0.02
Msh6P54276 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.96□□□□□ -0.02
Msh6P54276 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.96□□□□□ -0.02
Msh6P54276 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.96□□□□□ -0.02
Msh6P54276 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.96□□□□□ -0.02
Msh6P54276 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Msh6P54276 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
Msh6P54276 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Msh6P54276 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.95□□□□□ -0.02
Msh6P54276 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Msh6P54276 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Msh6P54276 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.95□□□□□ -0.02
Msh6P54276 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Msh6P54276 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Msh6P54276 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.95□□□□□ -0.02
Msh6P54276 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Msh6P54276 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.95□□□□□ -0.02
Msh6P54276 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.95□□□□□ -0.02
Msh6P54276 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Msh6P54276 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.95□□□□□ -0.02
Msh6P54276 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Msh6P54276 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Msh6P54276 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Msh6P54276 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.94□□□□□ -0.02
Msh6P54276 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms