Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.87□□□□□ -0.51
Fdft1P53798 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.87□□□□□ -0.51
Fdft1P53798 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.87□□□□□ -0.51
Fdft1P53798 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.87□□□□□ -0.51
Fdft1P53798 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Fdft1P53798 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Fdft1P53798 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Fdft1P53798 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fdft1P53798 Btrc-209ENSMUST00000224478 2194 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Fdft1P53798 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Fdft1P53798 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm11930-201ENSMUST00000117788 190 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 Gm14247-201ENSMUST00000120950 237 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Fdft1P53798 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.86□□□□□ -0.51
Fdft1P53798 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm9899-201ENSMUST00000065519 555 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fdft1P53798 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.86□□□□□ -0.51
Fdft1P53798 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Fdft1P53798 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fdft1P53798 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.85□□□□□ -0.51
Fdft1P53798 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.85□□□□□ -0.51
Fdft1P53798 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Fdft1P53798 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fdft1P53798 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms