Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SqleP52019 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SqleP52019 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
SqleP52019 Gm6644-201ENSMUST00000186507 951 ntBASIC12.87□□□□□ -0.35
SqleP52019 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SqleP52019 Gm37782-201ENSMUST00000194879 678 ntBASIC12.87□□□□□ -0.35
SqleP52019 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.87□□□□□ -0.35
SqleP52019 Gm26670-202ENSMUST00000226862 340 ntBASIC12.87□□□□□ -0.35
SqleP52019 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SqleP52019 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SqleP52019 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SqleP52019 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.87□□□□□ -0.35
SqleP52019 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SqleP52019 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Gm13422-201ENSMUST00000118834 504 ntBASIC12.86□□□□□ -0.35
SqleP52019 Gm13204-201ENSMUST00000120110 821 ntBASIC12.86□□□□□ -0.35
SqleP52019 Gm9166-201ENSMUST00000120293 561 ntBASIC12.86□□□□□ -0.35
SqleP52019 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.86□□□□□ -0.35
SqleP52019 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Gm16030-201ENSMUST00000159098 603 ntBASIC12.86□□□□□ -0.35
SqleP52019 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.86□□□□□ -0.35
SqleP52019 Gm44216-201ENSMUST00000203942 157 ntBASIC12.86□□□□□ -0.35
SqleP52019 Gm45094-201ENSMUST00000207013 617 ntBASIC12.86□□□□□ -0.35
SqleP52019 Gm45481-201ENSMUST00000209717 877 ntBASIC12.86□□□□□ -0.35
SqleP52019 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SqleP52019 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.86□□□□□ -0.35
SqleP52019 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.86□□□□□ -0.35
SqleP52019 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.86□□□□□ -0.35
SqleP52019 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SqleP52019 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.86□□□□□ -0.35
SqleP52019 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SqleP52019 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SqleP52019 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Gm25562-201ENSMUST00000104608 133 ntBASIC12.85□□□□□ -0.35
SqleP52019 Mir453-201ENSMUST00000104732 82 ntBASIC12.85□□□□□ -0.35
SqleP52019 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SqleP52019 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SqleP52019 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.85□□□□□ -0.35
SqleP52019 Gm14395-201ENSMUST00000120494 563 ntBASIC12.85□□□□□ -0.35
SqleP52019 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms