Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RoraP51448 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RoraP51448 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RoraP51448 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
RoraP51448 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
RoraP51448 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RoraP51448 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RoraP51448 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RoraP51448 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RoraP51448 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RoraP51448 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.27□□□□□ -0.6
RoraP51448 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.27□□□□□ -0.61
RoraP51448 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
RoraP51448 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RoraP51448 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Gm24891-201ENSMUST00000104391 136 ntBASIC11.27□□□□□ -0.61
RoraP51448 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
RoraP51448 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.27□□□□□ -0.61
RoraP51448 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
RoraP51448 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
RoraP51448 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RoraP51448 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.27□□□□□ -0.61
RoraP51448 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.27□□□□□ -0.61
RoraP51448 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RoraP51448 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RoraP51448 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
RoraP51448 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.27□□□□□ -0.61
RoraP51448 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.27□□□□□ -0.61
RoraP51448 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RoraP51448 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 Gm15432-201ENSMUST00000121106 195 ntBASIC11.26□□□□□ -0.61
RoraP51448 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.26□□□□□ -0.61
RoraP51448 Gm27390-201ENSMUST00000184516 176 ntBASIC11.26□□□□□ -0.61
RoraP51448 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.26□□□□□ -0.61
RoraP51448 Gm37246-201ENSMUST00000192665 835 ntBASIC11.26□□□□□ -0.61
RoraP51448 Gm18893-201ENSMUST00000198416 943 ntBASIC11.26□□□□□ -0.61
RoraP51448 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.26□□□□□ -0.61
RoraP51448 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.26□□□□□ -0.61
RoraP51448 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.26□□□□□ -0.61
RoraP51448 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.26□□□□□ -0.61
RoraP51448 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
RoraP51448 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.26□□□□□ -0.61
RoraP51448 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RoraP51448 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.25□□□□□ -0.61
RoraP51448 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.25□□□□□ -0.61
RoraP51448 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RoraP51448 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RoraP51448 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms