Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm14193-201ENSMUST00000105067 153 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm22711-201ENSMUST00000116890 133 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm27390-201ENSMUST00000184516 176 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm29499-201ENSMUST00000189151 486 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm28329-201ENSMUST00000191208 689 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm29171-201ENSMUST00000191397 486 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm9463-201ENSMUST00000206707 601 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.23□□□□□ -0.61
Nkx2-6P43688 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-6P43688 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm15207-201ENSMUST00000119259 442 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm15782-201ENSMUST00000121073 445 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Gm22138-201ENSMUST00000158748 128 ntBASIC11.22□□□□□ -0.61
Nkx2-6P43688 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-6P43688 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms