Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.16□□□□□ -0.62
Sox6P40645 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox6P40645 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox6P40645 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox6P40645 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.16□□□□□ -0.62
Sox6P40645 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox6P40645 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox6P40645 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.15□□□□□ -0.62
Sox6P40645 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox6P40645 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox6P40645 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Gm13875-201ENSMUST00000120162 282 ntBASIC11.15□□□□□ -0.62
Sox6P40645 Gm14999-201ENSMUST00000121039 624 ntBASIC11.15□□□□□ -0.62
Sox6P40645 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox6P40645 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Sox6P40645 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox6P40645 Gm27516-201ENSMUST00000184237 98 ntBASIC11.15□□□□□ -0.62
Sox6P40645 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox6P40645 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox6P40645 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.15□□□□□ -0.62
Sox6P40645 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox6P40645 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox6P40645 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.15□□□□□ -0.62
Sox6P40645 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox6P40645 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox6P40645 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.15□□□□□ -0.63
Sox6P40645 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Sox6P40645 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox6P40645 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sox6P40645 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox6P40645 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Sox6P40645 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.14□□□□□ -0.63
Sox6P40645 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox6P40645 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Gm11222-201ENSMUST00000119005 738 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Gm14760-201ENSMUST00000121831 999 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox6P40645 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox6P40645 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Gm2991-201ENSMUST00000173338 480 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Gm9022-201ENSMUST00000182482 992 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Gm27243-201ENSMUST00000183964 521 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox6P40645 Gm44364-201ENSMUST00000198368 141 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Gm45331-201ENSMUST00000209868 554 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms