Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm14395-201ENSMUST00000120494 563 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Cxcl12P40224 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm26670-202ENSMUST00000226862 340 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.18□□□□□ -0.46
Cxcl12P40224 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cxcl12P40224 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcl12P40224 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.17□□□□□ -0.46
Cxcl12P40224 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.17□□□□□ -0.46
Cxcl12P40224 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.17□□□□□ -0.46
Cxcl12P40224 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcl12P40224 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cxcl12P40224 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cxcl12P40224 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cxcl12P40224 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.16□□□□□ -0.46
Cxcl12P40224 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms