Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Gm10312-201ENSMUST00000078515 489 ntBASIC12.14□□□□□ -0.47
Mmp13P33435 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Mmp13P33435 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.14□□□□□ -0.47
Mmp13P33435 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp13P33435 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Mmp13P33435 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Mmp13P33435 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Mmp13P33435 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.13□□□□□ -0.47
Mmp13P33435 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Mmp13P33435 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm15276-201ENSMUST00000145953 498 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Gm28882-201ENSMUST00000185504 314 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Gm4857-201ENSMUST00000192718 785 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.13□□□□□ -0.47
Mmp13P33435 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.13□□□□□ -0.47
Mmp13P33435 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Mmp13P33435 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Mmp13P33435 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp13P33435 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.12□□□□□ -0.47
Mmp13P33435 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.12□□□□□ -0.47
Mmp13P33435 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Mmp13P33435 Gm14109-201ENSMUST00000118814 309 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gm15808-201ENSMUST00000119046 604 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gm14247-201ENSMUST00000120950 237 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Mmp13P33435 Rprl1-201ENSMUST00000158050 327 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.12□□□□□ -0.47
Mmp13P33435 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Gm5706-201ENSMUST00000181525 993 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Gm38241-201ENSMUST00000192641 898 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gm18711-201ENSMUST00000199341 750 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Gm8712-201ENSMUST00000221090 701 ntBASIC12.12□□□□□ -0.47
Mmp13P33435 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Mmp13P33435 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Mmp13P33435 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms