Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a11P31650 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.29□□□□□ -0.6
Slc6a11P31650 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a11P31650 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a11P31650 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm24934-201ENSMUST00000103764 111 ntBASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm23270-201ENSMUST00000104055 131 ntBASIC11.28□□□□□ -0.6
Slc6a11P31650 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.28□□□□□ -0.6
Slc6a11P31650 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm27046-201ENSMUST00000182160 463 ntBASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.28□□□□□ -0.6
Slc6a11P31650 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a11P31650 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a11P31650 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.27□□□□□ -0.6
Slc6a11P31650 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Slc6a11P31650 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Slc6a11P31650 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms