Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cops4O88544 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cops4O88544 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cops4O88544 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.94□□□□□ -0.66
Cops4O88544 Gm12502-201ENSMUST00000120197 444 ntBASIC10.94□□□□□ -0.66
Cops4O88544 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.94□□□□□ -0.66
Cops4O88544 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.94□□□□□ -0.66
Cops4O88544 Gm8602-201ENSMUST00000184045 607 ntBASIC10.94□□□□□ -0.66
Cops4O88544 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.94□□□□□ -0.66
Cops4O88544 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cops4O88544 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.94□□□□□ -0.66
Cops4O88544 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.94□□□□□ -0.66
Cops4O88544 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Gm12390-201ENSMUST00000117897 397 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.93□□□□□ -0.66
Cops4O88544 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Gm8018-201ENSMUST00000173536 789 ntBASIC10.93□□□□□ -0.66
Cops4O88544 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cops4O88544 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.93□□□□□ -0.66
Cops4O88544 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.93□□□□□ -0.66
Cops4O88544 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Cops4O88544 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.93□□□□□ -0.66
Cops4O88544 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops4O88544 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Cops4O88544 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cops4O88544 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops4O88544 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cops4O88544 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.92□□□□□ -0.66
Cops4O88544 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops4O88544 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms