Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm43133-201ENSMUST00000197472 463 ntBASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm5781-201ENSMUST00000219792 443 ntBASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.9□□□□□ -0.66
ClpxQ9JHS4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClpxQ9JHS4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClpxQ9JHS4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm23931-201ENSMUST00000103842 109 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm11591-201ENSMUST00000120063 702 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm7809-201ENSMUST00000153199 742 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpxQ9JHS4 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms