Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Mir5120-201ENSMUST00000175020 78 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm25732-201ENSMUST00000175168 60 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm27552-201ENSMUST00000183351 62 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm27844-201ENSMUST00000183613 62 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm8956-201ENSMUST00000203939 825 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm4607-201ENSMUST00000206649 577 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm4157-201ENSMUST00000211647 679 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm270-201ENSMUST00000223010 976 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm26448-201ENSMUST00000082446 203 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ssbp3Q9D032 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm14247-201ENSMUST00000120950 237 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm12566-201ENSMUST00000121479 359 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm18734-201ENSMUST00000172937 808 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Nsd1-205ENSMUST00000224693 852 ntBASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms