Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm14381-201ENSMUST00000122105 414 ntBASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Mir6420-201ENSMUST00000185032 102 ntBASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.65□□□□□ -0.54
Trim16Q99PP9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim16Q99PP9 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim16Q99PP9 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trim16Q99PP9 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trim16Q99PP9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trim16Q99PP9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.64□□□□□ -0.55
Trim16Q99PP9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.64□□□□□ -0.55
Trim16Q99PP9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.64□□□□□ -0.55
Trim16Q99PP9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim16Q99PP9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.63□□□□□ -0.55
Trim16Q99PP9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Gm24934-201ENSMUST00000103764 111 ntBASIC11.63□□□□□ -0.55
Trim16Q99PP9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Gm11930-201ENSMUST00000117788 190 ntBASIC11.63□□□□□ -0.55
Trim16Q99PP9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim16Q99PP9 Gm20482-202ENSMUST00000174729 825 ntBASIC11.63□□□□□ -0.55
Trim16Q99PP9 Gm3096-201ENSMUST00000185770 364 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms