Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb21Q91V48 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Mir7677-201ENSMUST00000184226 67 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm43184-201ENSMUST00000197247 542 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm18038-201ENSMUST00000197900 485 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm2553-201ENSMUST00000215986 605 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm8385-201ENSMUST00000058999 643 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb21Q91V48 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm5616-201ENSMUST00000165252 384 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm8741-201ENSMUST00000174736 384 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm4607-201ENSMUST00000206649 577 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gm18730-201ENSMUST00000218038 343 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb21Q91V48 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms