Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.67□□□□□ -0.22
Pspc1Q8R326 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.67□□□□□ -0.22
Pspc1Q8R326 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pspc1Q8R326 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm13888-201ENSMUST00000119148 422 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm14460-201ENSMUST00000121511 639 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm12208-201ENSMUST00000122004 163 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm45550-201ENSMUST00000209380 946 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm6867-201ENSMUST00000219165 425 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.66□□□□□ -0.22
Pspc1Q8R326 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.66□□□□□ -0.22
Pspc1Q8R326 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm14193-201ENSMUST00000105067 153 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm12579-201ENSMUST00000118040 783 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm29499-201ENSMUST00000189151 486 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm28329-201ENSMUST00000191208 689 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm29171-201ENSMUST00000191397 486 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm38117-201ENSMUST00000194653 939 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.65□□□□□ -0.22
Pspc1Q8R326 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pspc1Q8R326 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms