Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12□□□□□ -0.49
Clip4Q8CI96 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clip4Q8CI96 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Gm13665-201ENSMUST00000120830 528 ntBASIC11.99□□□□□ -0.49
Clip4Q8CI96 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.99□□□□□ -0.49
Clip4Q8CI96 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clip4Q8CI96 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm23119-201ENSMUST00000158610 140 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm44958-201ENSMUST00000203734 736 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.98□□□□□ -0.49
Clip4Q8CI96 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Clip4Q8CI96 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clip4Q8CI96 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clip4Q8CI96 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.97□□□□□ -0.49
Clip4Q8CI96 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clip4Q8CI96 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clip4Q8CI96 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clip4Q8CI96 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clip4Q8CI96 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clip4Q8CI96 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clip4Q8CI96 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms