Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm12795-201ENSMUST00000117594 539 ntBASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm4654-201ENSMUST00000183305 982 ntBASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.62□□□□□ -0.55
Rab43Q8CG50 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab43Q8CG50 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm16397-201ENSMUST00000122201 494 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm21092-201ENSMUST00000178995 955 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm28324-201ENSMUST00000187913 264 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm37299-201ENSMUST00000193951 826 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm43852-201ENSMUST00000202098 917 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gm6867-201ENSMUST00000219165 425 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.61□□□□□ -0.55
Rab43Q8CG50 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab43Q8CG50 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms