Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gm15370-201ENSMUST00000117158 253 ntBASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gm24845-201ENSMUST00000158034 109 ntBASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gm18711-201ENSMUST00000199341 750 ntBASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc40Q8BI79 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm12241-201ENSMUST00000118330 726 ntBASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm9996-201ENSMUST00000070359 913 ntBASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc40Q8BI79 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc40Q8BI79 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm27501-201ENSMUST00000183599 107 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms