Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Slc5a7Q8BGY9 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm11700-201ENSMUST00000119409 403 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm5706-201ENSMUST00000181525 993 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm44855-201ENSMUST00000205725 362 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm17931-201ENSMUST00000208132 634 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.37□□□□□ -0.75
Slc5a7Q8BGY9 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms