Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm27627-201ENSMUST00000183644 150 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm29615-201ENSMUST00000185371 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28224-201ENSMUST00000186078 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm29001-201ENSMUST00000186177 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28292-201ENSMUST00000186593 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28101-201ENSMUST00000187608 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm29076-201ENSMUST00000187689 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28302-201ENSMUST00000187931 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28646-201ENSMUST00000188220 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28205-201ENSMUST00000189177 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm29032-201ENSMUST00000189797 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm28695-201ENSMUST00000190300 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm37448-201ENSMUST00000192795 697 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm42599-201ENSMUST00000201308 469 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm43962-201ENSMUST00000203898 190 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.79□□□□□ -0.52
Ubp1Q811S7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubp1Q811S7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm5419-201ENSMUST00000119301 527 ntBASIC11.78□□□□□ -0.52
Ubp1Q811S7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.78□□□□□ -0.52
Ubp1Q811S7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm24749-201ENSMUST00000157838 343 ntBASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.78□□□□□ -0.52
Ubp1Q811S7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms