Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm23912-201ENSMUST00000104687 87 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12616-201ENSMUST00000118594 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12196-201ENSMUST00000120954 262 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12624-201ENSMUST00000177615 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12621-201ENSMUST00000177760 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12615-201ENSMUST00000177970 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12622-201ENSMUST00000177975 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12627-201ENSMUST00000178412 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12625-201ENSMUST00000179122 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12614-201ENSMUST00000179586 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm12613-201ENSMUST00000180323 382 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm18711-201ENSMUST00000199341 750 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm1821-202ENSMUST00000227415 750 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.52□□□□□ -0.73
Slc46a1Q6PEM8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm15432-201ENSMUST00000121106 195 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm9211-201ENSMUST00000182882 975 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm19353-201ENSMUST00000184561 445 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm28196-201ENSMUST00000187719 640 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Gm4157-201ENSMUST00000211647 679 ntBASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc46a1Q6PEM8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc46a1Q6PEM8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms