Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm5904-201ENSMUST00000210286 865 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm45930-201ENSMUST00000221330 292 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 AC131100.2-201ENSMUST00000227701 998 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 AC132918.1-201ENSMUST00000227877 925 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm24526-201ENSMUST00000082921 158 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm7647-201ENSMUST00000200996 1389 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.1□□□□□ -0.95
Foxc1Q61572 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Foxc1Q61572 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Foxc1Q61572 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm15370-201ENSMUST00000117158 253 ntBASIC9.09□□□□□ -0.95
Foxc1Q61572 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm6222-202ENSMUST00000182143 629 ntBASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.09□□□□□ -0.95
Foxc1Q61572 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm37337-201ENSMUST00000192601 993 ntBASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm37560-201ENSMUST00000194289 1000 ntBASIC9.09□□□□□ -0.95
Foxc1Q61572 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm42640-201ENSMUST00000199792 1195 ntBASIC9.09□□□□□ -0.95
Foxc1Q61572 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.09□□□□□ -0.95
Foxc1Q61572 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.09□□□□□ -0.95
Foxc1Q61572 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Foxc1Q61572 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms