Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm42599-201ENSMUST00000201308 469 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm44647-201ENSMUST00000207402 428 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13549-201ENSMUST00000118339 796 ntBASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc88aQ5SNZ0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm15003-201ENSMUST00000118884 446 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm25604-201ENSMUST00000158359 133 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm5298-201ENSMUST00000201122 892 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm28937-201ENSMUST00000185413 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm29400-201ENSMUST00000187208 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm28662-201ENSMUST00000188446 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm28251-201ENSMUST00000188835 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm37318-201ENSMUST00000194325 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm38017-201ENSMUST00000194768 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm37287-201ENSMUST00000195449 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm37793-201ENSMUST00000195548 695 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms