Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn2bQ56A07 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Gm25214-201ENSMUST00000104573 129 ntBASIC11.74□□□□□ -0.53
Scn2bQ56A07 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Gm20482-202ENSMUST00000174729 825 ntBASIC11.74□□□□□ -0.53
Scn2bQ56A07 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.74□□□□□ -0.53
Scn2bQ56A07 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn2bQ56A07 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm14441-201ENSMUST00000121960 540 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm15547-201ENSMUST00000122152 333 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm7584-201ENSMUST00000175829 940 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.73□□□□□ -0.53
Scn2bQ56A07 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scn2bQ56A07 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.72□□□□□ -0.53
Scn2bQ56A07 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scn2bQ56A07 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn2bQ56A07 Gm24255-201ENSMUST00000104481 128 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms