Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Gm12663-201ENSMUST00000118481 958 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Gm11700-201ENSMUST00000119409 403 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Gm14497-201ENSMUST00000119537 580 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Gm22846-201ENSMUST00000157706 270 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Trav11n-201ENSMUST00000200113 343 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Gm43760-201ENSMUST00000202120 3015 ntBASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Arhgef40Q3UPH7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gm22594-201ENSMUST00000104251 130 ntBASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gm13445-201ENSMUST00000121664 307 ntBASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gm12906-201ENSMUST00000154610 441 ntBASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Arhgef40Q3UPH7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Gm15197-201ENSMUST00000120526 478 ntBASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Gm16030-201ENSMUST00000159098 603 ntBASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 AC122891.1-201ENSMUST00000218671 268 ntBASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Arhgef40Q3UPH7 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Gm17214-201ENSMUST00000164501 541 ntBASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Gm5342-201ENSMUST00000181982 1003 ntBASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Gm18801-201ENSMUST00000186616 536 ntBASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC17.16■□□□□ 0.34
Arhgef40Q3UPH7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms