Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nhlrc4Q3UP44 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gm12217-201ENSMUST00000118858 696 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gm12266-201ENSMUST00000120311 962 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Gm16505-201ENSMUST00000179981 232 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 AU022133-201ENSMUST00000200601 873 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nhlrc4Q3UP44 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nhlrc4Q3UP44 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nhlrc4Q3UP44 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nhlrc4Q3UP44 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.9□□□□□ -0.67
Nhlrc4Q3UP44 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nhlrc4Q3UP44 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Nhlrc4Q3UP44 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nhlrc4Q3UP44 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms