Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm18893-201ENSMUST00000198416 943 ntBASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.84□□□□□ -0.51
Trafd1Q3UDK1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm14381-201ENSMUST00000122105 414 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm43002-201ENSMUST00000200310 155 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm21769-201ENSMUST00000211922 111 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm6082-201ENSMUST00000215204 454 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Morn2-202ENSMUST00000227729 656 ntBASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.83□□□□□ -0.52
Trafd1Q3UDK1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm11531-201ENSMUST00000117614 555 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm11439-201ENSMUST00000118598 409 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm11700-201ENSMUST00000119409 403 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm27320-201ENSMUST00000184892 109 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm37466-201ENSMUST00000195692 652 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trafd1Q3UDK1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms